PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA2867
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family Dof
Protein Properties Length: 300aa    MW: 33932.8 Da    PI: 5.8919
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA2867genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof62.39.1e-201244638
                    zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrr 38
                               +cprC s+ntkfCyynnysl+qPryfCk+Crr
  Tp57577_TGAC_v2_mRNA2867 12 PNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRR 44
                              58******************************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027011.7E-151273IPR003851Zinc finger, Dof-type
PROSITE profilePS5088420.0951275IPR003851Zinc finger, Dof-type
ProDomPD0074783.0E-141444IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MESEWKANEI TPNCPRCGSS NTKFCYYNNY SLTQPRYFCK GCRRXXXXXX XXXXXXXXXX  60
XXXXPVGGGC RKNRRGNNKT LLRQQSFDSL TFKNSDTIGH HSYDPILRTN NIISSSSCSS  120
LVNTDRPNID LALVYANFLN KKPDSQNNSD QMEKRPFDPL ENSRLSNVEV GSSSLNLSEL  180
ELGFKGCLSL QEQLQSTTVT HFSEFNSMQT LQKDRIDHCN IIHDDGVNFE LPPLPGEEDS  240
SSHVLWSNSE MMMNLPFQVT QPPPPPPPLL GPDQIHDADL LIGNWSPFDF TRDNSFSRP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013467842.11e-144Dof domain zinc finger protein
TrEMBLA0A072VIR11e-144A0A072VIR1_MEDTR; Dof domain zinc finger protein
STRINGGLYMA10G10142.12e-88(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18173394
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-20Dof family protein